Extensive sequence divergence between the reference genomes of two elite indica rice varieties Zhenshan 97 and Minghui 63

Simple item page
cg.contributor.affiliationHuazhong Agricultural Universityen
cg.contributor.affiliationUniversity of Arizonaen
cg.contributor.affiliationInternational Rice Research Instituteen
cg.identifier.doihttps://doi.org/10.1073/pnas.1611012113en
cg.issn0027-8424en
cg.issue35en
cg.journalProceedings of the National Academy of Sciencesen
cg.volume113en
dc.contributor.authorZhang, Jianweien
dc.contributor.authorChen, Ling-Lingen
dc.contributor.authorXing, Fengen
dc.contributor.authorKudrna, David A.en
dc.contributor.authorYao, Wenen
dc.contributor.authorCopetti, Darioen
dc.contributor.authorMu, Tingen
dc.contributor.authorLi, Weimingen
dc.contributor.authorSong, Jia-Mingen
dc.contributor.authorXie, Weiboen
dc.contributor.authorLee, Seungheeen
dc.contributor.authorTalag, Jaysonen
dc.contributor.authorShao, Linen
dc.contributor.authorAn, Yueen
dc.contributor.authorZhang, Chun-Liuen
dc.contributor.authorOuyang, Yidanen
dc.contributor.authorSun, Shuaien
dc.contributor.authorJiao, Wen-Biaoen
dc.contributor.authorLv, Fangen
dc.contributor.authorDu, Boguen
dc.contributor.authorLuo, Meizhongen
dc.contributor.authorMaldonado, Carlos Ernestoen
dc.contributor.authorGoicoechea, Jose Luisen
dc.contributor.authorXiong, Lizhongen
dc.contributor.authorWu, Changyinen
dc.contributor.authorXing, Yongzhongen
dc.contributor.authorZhou, Dao-Xiuen
dc.contributor.authorYu, Sibinen
dc.contributor.authorZhao, Yuen
dc.contributor.authorWang, Gongweien
dc.contributor.authorYu, Yeisooen
dc.contributor.authorLuo, Yijieen
dc.contributor.authorZhou, Zhi-Weien
dc.contributor.authorHurtado, Beatriz Elena Padillaen
dc.contributor.authorDanowitz, Annen
dc.contributor.authorWing, Rod A.en
dc.contributor.authorZhang, Qifaen
dc.date.accessioned2024-12-19T12:54:50Zen
dc.date.available2024-12-19T12:54:50Zen
dc.identifier.urihttps://hdl.handle.net/10568/165221
dc.titleExtensive sequence divergence between the reference genomes of two elite indica rice varieties Zhenshan 97 and Minghui 63en
dcterms.abstractIndica rice accounts for >70% of total rice production worldwide, is genetically highly diverse, and can be divided into two major varietal groups independently bred and widely cultivated in China and Southeast Asia. Here, we generated high-quality genome sequences for two elite rice varieties, Zhenshan 97 and Minghui 63, representing the two groups of indica rice and the parents of a leading rice hybrid. Comparative analyses uncovered extensive structural differences between the two genomes and complementarity in their hybrid transcriptome. These findings have general implications for understanding intraspecific variations of organisms with complex genomes. The availability of the two genomes will serve as a foundation for future genome-based explorations in rice toward both basic and applied goals.en
dcterms.available2016-08-17
dcterms.bibliographicCitationZhang, Jianwei; Chen, Ling-Ling; Xing, Feng; Kudrna, David A.; Yao, Wen; Copetti, Dario; Mu, Ting; Li, Weiming; Song, Jia-Ming; Xie, Weibo; Lee, Seunghee; Talag, Jayson; Shao, Lin; An, Yue; Zhang, Chun-Liu; Ouyang, Yidan; Sun, Shuai; Jiao, Wen-Biao; Lv, Fang; Du, Bogu; Luo, Meizhong; Maldonado, Carlos Ernesto; Goicoechea, Jose Luis; Xiong, Lizhong; Wu, Changyin; Xing, Yongzhong; Zhou, Dao-Xiu; Yu, Sibin; Zhao, Yu; Wang, Gongwei; Yu, Yeisoo; Luo, Yijie; Zhou, Zhi-Wei; Hurtado, Beatriz Elena Padilla; Danowitz, Ann; Wing, Rod A. and Zhang, Qifa. 2016. Extensive sequence divergence between the reference genomes of two elite indica rice varieties Zhenshan 97 and Minghui 63. Proc. Natl. Acad. Sci. U.S.A., Volume 113, no. 35en
dcterms.issued2016-08-30
dcterms.languageen
dcterms.licenseCopyrighted; all rights reserved
dcterms.publisherNational Academy of Sciencesen
dcterms.typeJournal Article

Files

Collections

IRRI Journal Articles