Studies on genetic polymorphism of improved cowpea varieties using Simple Sequence Repeats (SSR) marker

cg.authorship.typesCGIAR and developing country instituteen
cg.contributor.affiliationFederal University of Agriculture, Makurdien
cg.contributor.affiliationInternational Institute of Tropical Agricultureen
cg.contributor.crpGrain Legumes
cg.contributor.donorCGIAR Trust Funden
cg.contributor.initiativeGenebanks
cg.coverage.countryNigeria
cg.coverage.iso3166-alpha2NG
cg.coverage.regionAfrica
cg.coverage.regionWestern Africa
cg.creator.identifierLucky Omoigui: 0000-0001-8473-2775
cg.howPublishedFormally Publisheden
cg.identifier.doihttps://doi.org/10.17311/rjb.2023.36.42en
cg.identifier.iitathemeBIOTECH & PLANT BREEDING
cg.issn1816-4919en
cg.issue1en
cg.journalResearch Journal of Botanyen
cg.reviewStatusPeer Reviewen
cg.subject.actionAreaGenetic Innovation
cg.subject.iitaAGRONOMYen
cg.subject.iitaCOWPEAen
cg.subject.iitaFOOD SECURITYen
cg.subject.iitaGENETIC IMPROVEMENTen
cg.subject.iitaGRAIN LEGUMESen
cg.subject.iitaPLANT BREEDINGen
cg.subject.iitaPLANT PRODUCTIONen
cg.subject.impactAreaNutrition, health and food security
cg.subject.sdgSDG 2 - Zero hungeren
cg.volume18en
dc.contributor.authorOlasan, O.J.en
dc.contributor.authorOmoigui, L.en
dc.contributor.authorOluma, H.A.en
dc.contributor.authorAguoru, C.U.en
dc.contributor.authorDeo, D.en
dc.contributor.authorUgbaa, M.S.en
dc.contributor.authorEzugwu, J.en
dc.contributor.authorEkeruo, G.en
dc.contributor.authorDughduh, P.en
dc.contributor.authorIyorkaa, N.en
dc.contributor.authorSimon, M.en
dc.contributor.authorOkoh, T.en
dc.date.accessioned2023-11-06T11:13:16Zen
dc.date.available2023-11-06T11:13:16Zen
dc.identifier.urihttps://hdl.handle.net/10568/132753
dc.titleStudies on genetic polymorphism of improved cowpea varieties using Simple Sequence Repeats (SSR) markeren
dcterms.abstractBackground and Objective: Several new varieties are released from breeding programs targeted at solving specific threats to cowpea production in Nigeria. As part of efforts to promote crop improvement, this study was carried out to determine the level of genetic polymorphism and phylogenetic relationship that exists among four selected improved varieties of cowpea (SAMPEA-14, SAMPEA-15, SAMPEA-17 and SAMPEA-18) using ten SSR molecular markers. Materials and Methods: The DNA was extracted from 14 days old seedling using the CTAB method. A total of 10 SSR primers were used in the DNA amplification process on a programmed thermal cycler followed by electrophoresis, visualization and scoring of the banding pattern. Data were analyzed on the Minitab 16.0 software for clustering patterns while the Polymorphic Information Content (PIC) of each primer was calculated. Results: Polymorphic information content (PIC) ranged from 0.619 in RB20 to 0.881 in RB38 primers. The top three markers in PIC values were RB38 (PIC = 0.881), CLM0342 (PIC = 0.873) and RB7 (PIC = 0.866). The mean PIC of the ten primers was 0.884. The genetic similarity index of the dendrogram was very low as SAMPEA-17 showed the lowest similarity coefficients of 18.35 away from other varieties while SAMPEA-15 had similarity coefficients of 33.33. Conclusion: This study has revealed high genetic differences among the four varieties studied. All of the varieties may be used as genetic materials in breeding work to improve local landraces to achieve sustainable cowpea production and food security in Nigeria.en
dcterms.accessRightsOpen Access
dcterms.audienceScientistsen
dcterms.available2023-07-06
dcterms.bibliographicCitationOlasan, O.J., Omoigui, L., Oluma, H.A., Aguoru, C.U., Deo, D., Ugbaa, M.S., ... & Okoh, T. (2023). Studies on genetic polymorphism of improved cowpea varieties using Simple Sequence Repeats (SSR) marker. Research Journal of Botany, 18(1), 36-42.en
dcterms.descriptionOpen Access Journalen
dcterms.extent36-42en
dcterms.issued2023
dcterms.languageen
dcterms.licenseCC-BY-4.0
dcterms.subjectcowpeasen
dcterms.subjectbreedingen
dcterms.subjectpolymorphismen
dcterms.subjectvarietiesen
dcterms.subjectfood securityen
dcterms.subjectsimple sequence repeatsen
dcterms.typeJournal Article

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