Renyi Diversity Profiles with vegan, BiodiversityR and ggplot2
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Kindt, R., 2020. Renyi Diversity Profiles with vegan, BiodiversityR and ggplot2. https://rpubs.com/Roeland-KINDT/694066
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The main objective of this document is to give some examples of how data on Renyi diversity profiles, obtained via vegan and BiodiversityR, can be plotted via ggplot2. I expect that researchers and students will modify the scripts given here to create their own graphs. This obviously requires some working knowledge of the ggplot2 package, for which I will not give details here on specific functions, arguments and choices that I selected (as an introduction to ggplot2, I would especially recommend a two-part online workshop given by Thomas Lin Pedersen).